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View Structure Prediction Details

Protein: PER45_ARATH
Organism: Arabidopsis thaliana
Length: 325 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PER45_ARATH.

Description E-value Query
Range
Subject
Range
gi|78499684 - gi|78499684|gb|ABB45838.1| hypothetical protein [Thellungiella halophila]
365.0 [0..1] [325..1]

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Predicted Domain #1
Region A:
Residues: [1-325]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEKNTSQTIF SNFFLLLLLS SCVSAQLRTG FYQNSCPNVE TIVRNAVRQK FQQTFVTAPA  60
   61 TLRLFFHDCF VRGCDASIMI ASPSERDHPD DMSLAGDGFD TVVKAKQAVD SNPNCRNKVS 120
  121 CADILALATR EVVVLTGGPS YPVELGRRDG RISTKASVQS QLPQPEFNLN QLNGMFSRHG 180
  181 LSQTDMIALS GAHTIGFAHC GKMSKRIYNF SPTTRIDPSI NRGYVVQLKQ MCPIGVDVRI 240
  241 AINMDPTSPR TFDNAYFKNL QQGKGLFTSD QILFTDQRSR STVNSFANSE GAFRQAFITA 300
  301 ITKLGRVGVL TGNAGEIRRD CSRVN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 91.522879
Match: 1pa2A
Description: Plant peroxidase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.426850936668086 bayes_pls_golite062009
oxidoreductase activity 0.10399831600382 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle