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View Structure Prediction Details

Protein: ORC2_ARATH
Organism: Arabidopsis thaliana
Length: 363 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ORC2_ARATH.

Description E-value Query
Range
Subject
Range
ORC2_ORYSJ - Origin of replication complex subunit 2 OS=Oryza sativa subsp. japonica GN=ORC2 PE=2 SV=1
ORC2_ORYSI - Origin of replication complex subunit 2 OS=Oryza sativa subsp. indica GN=OsI_10291 PE=3 SV=1
493.0 [0..8] [361..21]

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Predicted Domain #1
Region A:
Residues: [1-172]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEDIENIEED EYGFSRNYFL AKELGGASKR SAHKLSDIHI VDEQELRETA STIEMKHSKE  60
   61 ISELMSDYKT MYSKWVFELR CGFGLLMYGF GSKKALVEDF ASASLTDYSV VVINGYLPSV 120
  121 NLKQVLLALA ELLSELLKCK RKSSGSLSKG QETFPSRSMD DILSFLHGPQ SG

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [173-363]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DKDCFICVVV HNIDGPALRD PESQQTLARL SSCSHIRLVA SIDHVNAPLL WDKKMVHKQF  60
   61 NWLWHHVPTF APYNVEGVFF PLVLAQGSTA QTAKTAAIVL QSLTPNGQNV FKILAEYQLS 120
  121 HPDEDGMPTD DLYSASRERF FVSSQVTLNS HLTEFKDHEL VKTKRNSDGQ ECLNIPLTSD 180
  181 AIRQLLLDLN Q

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle