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View Structure Prediction Details

Protein: MLO6_ARATH
Organism: Arabidopsis thaliana
Length: 583 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MLO6_ARATH.

Description E-value Query
Range
Subject
Range
gi|60617257 - gi|60617257|gb|AAX31277.1| MLO1 [Capsicum annuum]
830.0 [0..1] [583..1]
MLO2_ARATH - MLO-like protein 2 OS=Arabidopsis thaliana GN=MLO2 PE=1 SV=1
812.0 [0..1] [583..1]
gi|62208141 - gi|62208141|gb|AAX77014.1| MLO1 [Brassica rapa]
796.0 [0..1] [583..1]
gi|87241204 - gi|87241204|gb|ABD33062.1| Mlo-related protein [Medicago truncatula]
777.0 [0..1] [581..1]
gi|44458502, gi|... - gi|44458502|gb|AAK38337.2| seven transmembrane protein Mlo1 [Zea mays], gi|194694044|gb|ACF81106.1| ...
754.0 [0..1] [528..1]
gi|15290605, gi|... - gi|218192015|gb|EEC74442.1| hypothetical protein OsI_09833 [Oryza sativa Indica Group], gi|15290605|...
748.0 [0..1] [516..1]
gi|108705991, gi... - gi|6063540|dbj|BAA85400.1| unnamed protein product [Oryza sativa Japonica Group], gi|50948903|ref|XP...
748.0 [0..1] [516..1]

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Predicted Domain #1
Region A:
Residues: [1-131]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADQVKEKTL EETSTWAVAV VCFVLLLISI VIEKLIHKIG SWFKKKNKKA LYEALEKVKA  60
   61 ELMLMGFISL LLTIGQGYIS NICIPKNIAA SMHPCSASEE ARKYGKKDVP KEDEEENLRR 120
  121 KLLQLVDSLI P

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [132-264]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RRSLATKGYD KCAEKGKVAF VSAYGMHQLH IFIFVLAVCH VIYCIVTYAL GKTKMRRWKK  60
   61 WEEETKTIEY QYSHDPERFR FARDTSFGRR HLSFWSKSTI TLWIVCFFRQ FFRSVTKVDY 120
  121 LTLRHGFIMA HLA

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [265-480]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PGSDARFDFR KYIQRSLEED FKTIVEINPV IWFIAVLFLL TNTNGLNSYL WLPFIPFIVI  60
   61 LIVGTKLQVI ITKLGLRIQE KGDVVKGTPL VQPGDHFFWF GRPRFILFLI HLVLFTNAFQ 120
  121 LAFFVWSTYE FGLKNCFHES RVDVIIRISI GLLVQILCSY VTLPLYALVT QMGSKMKPTV 180
  181 FNERVATALK SWHHTAKKNI KHGRTSESTT PFSSRP

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [481-583]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TTPTHGSSPI HLLRNAPHKR SRSVDESFAN SFSPRNSDFD SWDPESQHET AETSNSNHRS  60
   61 RFGEEESEKK FVSSSVELPP GPGQIRTQHE ISTISLRDFS FKR

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle