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View Structure Prediction Details

Protein: MLO4_ARATH
Organism: Arabidopsis thaliana
Length: 573 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MLO4_ARATH.

Description E-value Query
Range
Subject
Range
gi|33942041, gi|... - gi|33942041|gb|AAQ55273.1| At1g11000 [Arabidopsis thaliana], gi|110736290|dbj|BAF00115.1| membrane p...
787.0 [0..1] [573..1]
gi|14718604 - gi|14718604|gb|AAK72963.1|AF388195_1 Mlo [Oryza sativa]
740.0 [0..1] [513..1]
gi|108705991, gi... - gi|6063540|dbj|BAA85400.1| unnamed protein product [Oryza sativa Japonica Group], gi|50948903|ref|XP...
739.0 [0..1] [513..1]
gi|44458502, gi|... - gi|44458502|gb|AAK38337.2| seven transmembrane protein Mlo1 [Zea mays], gi|194694044|gb|ACF81106.1| ...
734.0 [0..1] [523..1]
gi|60617257 - gi|60617257|gb|AAX31277.1| MLO1 [Capsicum annuum]
725.0 [0..1] [528..1]
gi|14334167 - gi|14334167|gb|AAK60566.1|AF384144_1 MLo protein [Triticum aestivum]
724.0 [0..8] [513..10]

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Predicted Domain #1
Region A:
Residues: [1-52]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEHMMKEGRS LAETPTYSVA SVVTVLVFVC FLVERAIYRF GKWLKKTRRK AL

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [53-124]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FTSLEKMKEE LMLLGLISLL LSQSARWISE ICVNSSLFNS KFYICSEEDY GIHKKVLLEH  60
   61 TSSTNQSSLP HH

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [125-251]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GIHEASHQCG HGREPFVSYE GLEQLLRFLF VLGITHVLYS GIAIGLAMSK IYSWRKWEAQ  60
   61 AIIMAESDIH AKKTKVMKRQ STFVFHHASH PWSNNRFLIW MLCFLRQFRG SIRKSDYFAL 120
  121 RLGFLTK

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [252-477]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 HNLPFTYNFH MYMVRTMEDE FHGIVGISWP LWVYAIVCIC INVHGLNMYF WISFVPAILV  60
   61 MLVGTKLEHV VSKLALEVKE QQTGTSNGAQ VKPRDGLFWF GKPEILLRLI QFIIFQNAFE 120
  121 MATFIWFLWG IKERSCFMKN HVMISSRLIS GVLVQFWCSY GTVPLNVIVT QMGSRHKKAV 180
  181 IAESVRDSLH SWCKRVKERS KHTRSVCSLD TATIDERDEM TVGTLS

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #5
Region A:
Residues: [478-573]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RSSSMTSLNQ ITINSIDQAE SIFGAAASSS SPQDGYTSRV EEYLSETYNN IGSIPPLNDE  60
   61 IEIEIEGEED NGGRGSGSDE NNGDAGETLL ELFRRT

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.936 a.24.28 Description not found.


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