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View Structure Prediction Details

Protein: MLO2_ARATH
Organism: Arabidopsis thaliana
Length: 573 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MLO2_ARATH.

Description E-value Query
Range
Subject
Range
gi|62208141 - gi|62208141|gb|AAX77014.1| MLO1 [Brassica rapa]
835.0 [0..1] [573..1]

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Predicted Domain #1
Region A:
Residues: [1-137]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADQVKERTL EETSTWAVAV VCFVLLFISI VLEHSIHKIG TWFKKKHKQA LFEALEKVKA  60
   61 ELMLLGFISL LLTIGQTPIS NICISQKVAS TMHPCSAAEE AKKYGKKDAG KKDDGDGDKP 120
  121 GRRLLLELAE SYIHRRS

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [138-267]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LATKGYDKCA EKGKVAFVSA YGIHQLHIFI FVLAVVHVVY CIVTYAFGKI KMRTWKSWEE  60
   61 ETKTIEYQYS NDPERFRFAR DTSFGRRHLN FWSKTRVTLW IVCFFRQFFG SVTKVDYLAL 120
  121 RHGFIMAHFA 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [268-498]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PGNESRFDFR KYIQRSLEKD FKTVVEISPV IWFVAVLFLL TNSYGLRSYL WLPFIPLVVI  60
   61 LIVGTKLEVI ITKLGLRIQE KGDVVRGAPV VQPGDDLFWF GKPRFILFLI HLVLFTNAFQ 120
  121 LAFFAWSTYE FNLNNCFHES TADVVIRLVV GAVVQILCSY VTLPLYALVT QMGSKMKPTV 180
  181 FNDRVATALK KWHHTAKNET KHGRHSGSNT PFSSRPTTPT HGSSPIHLLH N

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [499-573]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FNNRSVENYP SSPSPRYSGH GHHEHQFWDP ESQHQEAETS THHSLAHESS EPVLASVELP  60
   61 PIRTSKSLRD FSFKK

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle