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View Structure Prediction Details

Protein: MEX1_ARATH
Organism: Arabidopsis thaliana
Length: 415 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MEX1_ARATH.

Description E-value Query
Range
Subject
Range
gi|6137140, gi|2... - gi|6137140|gb|AAF04351.1|AF168391_1 root cap 1 [Arabidopsis thaliana], gi|21536538|gb|AAM60870.1| ro...
707.0 [0..1] [415..1]
gi|109895092 - gi|109895092|gb|ABG47411.1| maltose transporter [Malus x domestica]
522.0 [0..67] [414..76]
MEX1_ORYSA - Maltose excess protein 1-like, chloroplast precursor - Oryza sativa (Rice)
MEX1_ORYSJ - Maltose excess protein 1-like, chloroplastic OS=Oryza sativa subsp. japonica GN=Os04g0602400 PE=2 SV...
482.0 [0..91] [414..75]
gi|116310928 - gi|116310928|emb|CAH67866.1| B0403H10-OSIGBa0105A11.18 [Oryza sativa (indica cultivar-group)]
480.0 [0..91] [414..75]
gi|116059768 - gi|116059768|emb|CAL55475.1| putative root cap protein RCP1 (ISS) [Ostreococcus tauri]
354.0 [0..101] [392..5]

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Predicted Domain #1
Region A:
Residues: [1-108]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEGKAIATSL GGDRVLIFPC SPRSSFVFTS RLSSLPLKRA SIGGAVSCSG VNGLTRWNSI  60
   61 VSTRRLVPVR SINSESDSDS DFPHENQQGN PGLGKFKEYQ EWDSWTAK

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [109-169]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FSGGANIPFL MLQLPQIILN TQNLLAGNNT ALSAVPWLGM LTGLLGNLSL LSYFAKKREK  60
   61 E

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [170-331]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 AAVVQTLGVV STHIVLAQLT MAEAMPIQYF VATSAVVTIG LIVNCLYYFG KLSKTVWQLW  60
   61 EDVITIGGLS VLPQIMWSTF VPLVPNSILP GTTAFGIAVA AIIMARTGKL SEKGVRFVGS 120
  121 LSGWTATLMF MWMPVSQMWT NFLNPDNIKG LSSITMLLSM MG

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [332-415]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NGLMIPRALF IRDLMWLTGS LWATLFYGYG NILCLYLVNC TSQSFFVAAT IGLISWIGLA  60
   61 LWRDAVAYGH NSPFRSLKEL VFGP

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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