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View Structure Prediction Details

Protein: MCCA_ARATH
Organism: Arabidopsis thaliana
Length: 734 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MCCA_ARATH.

Description E-value Query
Range
Subject
Range
gi|18379053 - gi|18379053|ref|NP_563674.1| MCCA; methylcrotonoyl-CoA carboxylase [Arabidopsis thaliana]
634.0 [0..1] [734..1]

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Predicted Domain #1
Region A:
Residues: [1-734]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSMMTVWALR RNVRRKNHSM LVRYISGSAS MKPKEQCIEK ILVANRGEIA CRIMRTAKRL  60
   61 GIQTVAVYSD ADRDSLHVKS ADEAVRIGPP SARLSYLSGV TIMEAAARTG AQAIHPGYGF 120
  121 LSESSDFAQL CEDSGLTFIG PPASAIRDMG DKSASKRIMG AAGVPLVPGY HGHEQDIDHM 180
  181 KSEAEKIGYP IIIKPTHGGG GKGMRIVQSG KDFADSFLGA QREAAASFGV NTILLEKYIT 240
  241 RPRHIEVQIF GDKHGNVLHL YERDCSVQRR HQKIIEEAPA PNISEKFRAN LGQAAVSAAR 300
  301 AVGYYNAGTV EFIVDTESDQ FYFMEMNTRL QVEHPVTEMI VGQDLVEWQI RVANGEPLPL 360
  361 SQSEVPMSGH AFEARIYAEN VPKGFLPATG VLNHYRPVAV SPSVRVETGV EQGDTVSMHY 420
  421 DPMIAKLVVW GGNRGEALVK LKDCLSNFQV AGVPTNINFL QKLASHKEFA VGNVETHFIE 480
  481 HHKSDLFADE SNPAATEVAY KAVKHSAALV AACISTIEHS TWNESNHGKV PSIWYSNPPF 540
  541 RVHHEAKQTI ELEWNNECEG TGSNLISLGV RYQPDGSYLI EEGNDSPSLE LRVTRAGKCD 600
  601 FRVEAAGLSM NVSLAAYLKD GYKHIHIWHG SEHHQFKQKV GIEFSEDEEG VQHRTSSETS 660
  661 SHPPGTIVAP MAGLVVKVLV ENEAKVDQGQ PILVLEAMKM EHVVKAPSSG SIQDLKVKAG 720
  721 QQVSDGSALF RIKG

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 159.0
Match: 2qf7A
Description: No description for 2qf7A was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle