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View Structure Prediction Details

Protein: KPRS1_ARATH
Organism: Arabidopsis thaliana
Length: 403 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for KPRS1_ARATH.

Description E-value Query
Range
Subject
Range
gi|51971799 - gi|51971799|dbj|BAD44564.1| phosphoribosyl pyrophosphate synthetase [Arabidopsis thaliana]
487.0 [0..1] [403..1]

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Predicted Domain #1
Region A:
Residues: [1-82]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASLGLSFPP AAKTPTYLAS SSSTFFSNSS LSVRTSQFRS RNSVFACVKC DMPESLNVGN  60
   61 GNPSIPIINE RTLPKFLESA RM

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [83-403]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EKSVNRTNTR LKLFSGTANP ALAQEIAWYM GLDLGKVNIK RFADGEIYVQ LQESVRGCDV  60
   61 YLVQPTCTPT NENLMELLIM VDACRRASAK KVTAVIPYFG YARADRKTQG RESIAAKLVA 120
  121 NLITEAGADR VLACDLHSGQ SMGYFDIPVD HVYCQPVILD YLASKSIPSE DLVVVSPDVG 180
  181 GVARARAFAK KLSDAPLAIV DKRRSGHNVA EVMNLIGDVR GKVAIMVDDM IDTAGTIVKG 240
  241 AALLHQEGAR EVYACCTHAV FSPPAIERLS GGLLQEVIVT NTLPVAEKNY FPQLTILSVA 300
  301 NLLGETIWRV HDDSSVSSIF L

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 106.0
Match: 1dkrA
Description: Phosphoribosylpyrophosphate synthetase
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle