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View Structure Prediction Details

Protein: ILVB_ARATH
Organism: Arabidopsis thaliana
Length: 670 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ILVB_ARATH.

Description E-value Query
Range
Subject
Range
ILVB1_BRANA - Acetolactate synthase 1, chloroplastic OS=Brassica napus PE=3 SV=1
663.0 [0..5] [670..1]
gi|37992804 - gi|37992804|gb|AAR06607.1| acetolactate synthase 2 [Camelina microcarpa]
660.0 [0..29] [670..25]
gi|1130684 - gi|1130684|emb|CAA87084.1| acetohydroxyacid synthase [Gossypium hirsutum]
654.0 [0..1] [670..1]
gi|13958149 - gi|13958149|gb|AAK50820.1|AF363369_1 acetolactate synthase [Amaranthus retroflexus]
653.0 [0..1] [670..1]
gi|13958151 - gi|13958151|gb|AAK50821.1|AF363370_1 acetolactate synthase [Amaranthus powellii]
653.0 [0..1] [670..1]
gi|33300530 - gi|33300530|emb|CAE18088.1| acetolactate synthase [Papaver rhoeas]
651.0 [0..1] [670..1]

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Predicted Domain #1
Region A:
Residues: [1-91]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAATTTTTT SSSISFSTKP SPSSSKSPLP ISRFSLPFSL NPNKSSSSSR RRGIKSSSPS  60
   61 SISAVLNTTT NVTTTPSPTK PTKPETFISR F

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [92-670]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 APDQPRKGAD ILVEALERQG VETVFAYPGG ASMEIHQALT RSSSIRNVLP RHEQGGVFAA  60
   61 EGYARSSGKP GICIATSGPG ATNLVSGLAD ALLDSVPLVA ITGQVPRRMI GTDAFQETPI 120
  121 VEVTRSITKH NYLVMDVEDI PRIIEEAFFL ATSGRPGPVL VDVPKDIQQQ LAIPNWEQAM 180
  181 RLPGYMSRMP KPPEDSHLEQ IVRLISESKK PVLYVGGGCL NSSDELGRFV ELTGIPVAST 240
  241 LMGLGSYPCD DELSLHMLGM HGTVYANYAV EHSDLLLAFG VRFDDRVTGK LEAFASRAKI 300
  301 VHIDIDSAEI GKNKTPHVSV CGDVKLALQG MNKVLENRAE ELKLDFGVWR NELNVQKQKF 360
  361 PLSFKTFGEA IPPQYAIKVL DELTDGKAII STGVGQHQMW AAQFYNYKKP RQWLSSGGLG 420
  421 AMGFGLPAAI GASVANPDAI VVDIDGDGSF IMNVQELATI RVENLPVKVL LLNNQHLGMV 480
  481 MQWEDRFYKA NRAHTFLGDP AQEDEIFPNM LLFAAACGIP AARVTKKADL REAIQTMLDT 540
  541 PGPYLLDVIC PHQEHVLPMI PSGGTFNDVI TEGDGRIKY

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 180.0
Match: 1ybhA
Description: Crystal structure of Arabidopsis thaliana Acetohydroxyacid synthase In Complex With A Sulfonylurea Herbicide Chlorimuron Ethyl
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle