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View Structure Prediction Details

Protein: IAA30_ARATH
Organism: Arabidopsis thaliana
Length: 172 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for IAA30_ARATH.

Description E-value Query
Range
Subject
Range
gi|34550779 - gi|34550779|gb|AAQ74955.1| Gbiaa-Re [Gossypium barbadense]
205.0 [0..14] [170..23]

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Predicted Domain #1
Region A:
Residues: [1-172]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGRGRSSSSS SIESSCKSNP FGVSSSNTRN LSTDLRLGLS FGSSSGQYYN GGDNHEYDGV  60
   61 GAAEEMMIME EEEQNECNSV GSFYVKVNME GVPIGRKIDL LSLNGYHDLI TTLDYMFNAS 120
  121 ILWAEEEDMC SEKSHVLTYA DKEGDWMMVG DVPWEMFLSS VRRLKISRAY HY

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.28
Match: 1ip9A
Description: Bud emergence mediator Bemp1
Matching Structure (courtesy of the PDB):

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