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View Structure Prediction Details

Protein: HEMH2_ARATH
Organism: Arabidopsis thaliana
Length: 512 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for HEMH2_ARATH.

Description E-value Query
Range
Subject
Range
gi|2623990 - gi|2623990|emb|CAA73614.1| ferrochelatase [Arabidopsis thaliana]
555.0 [0..1] [512..1]

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Predicted Domain #1
Region A:
Residues: [1-98]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNCPAMTASP SSSSSSSYST FRPPPPLLPQ LSNDSQRSVV MHCTRLPFEA FAATSSNRLL  60
   61 GKHSLPLRAA LVTSNPLNIS SSSVISDAIS SSSVITDD

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [99-512]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 AKIGVLLLNL GGPETLDDVQ PFLFNLFADP DIIRLPPVFQ FLQKPLAQFI SVARAPKSKE  60
   61 GYASIGGGSP LRHITDAQAE ELRKCLWEKN VPAKVYVGMR YWHPFTEEAI EQIKRDGITK 120
  121 LVVLPLYPQF SISTSGSSLR LLERIFREDE YLVNMQHTVI PSWYQREGYI KAMANLIQSE 180
  181 LGKFGSPNQV VIFFSAHGVP LAYVEEAGDP YKAEMEECVD LIMEELDKRK ITNAYTLAYQ 240
  241 SRVGPVEWLK PYTEEAITEL GKKGVENLLA VPISFVSEHI ETLEEIDVEY KELALKSGIK 300
  301 NWGRVPALGT EPMFISDLAD AVVESLPYVG AMAVSNLEAR QSLVPLGSVE ELLATYDSQR 360
  361 RELPAPVTMW EWGWTKSAET WNGRAAMLAV LALLVLEVTT GKGFLHQWGI LPSL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 100.0
Match: 2po7A
Description: No description for 2po7A was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle