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View Structure Prediction Details

Protein: HEMH1_ARATH
Organism: Arabidopsis thaliana
Length: 466 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for HEMH1_ARATH.

Description E-value Query
Range
Subject
Range
HEMH2_ARATH - Ferrochelatase-2, chloroplastic OS=Arabidopsis thaliana GN=At2g30390 PE=1 SV=1
485.0 [0..13] [447..31]

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Predicted Domain #1
Region A:
Residues: [1-86]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQATALSSGF NPLTKRKDHR FPRSCSQRNS LSLIQCDIKE RSFGESMTIT NRGLSFKTNV  60
   61 FEQARSVTGD CSYDETSAKA RSHVVA

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [87-466]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EDKIGVLLLN LGGPETLNDV QPFLYNLFAD PDIIRLPRPF QFLQGTIAKF ISVVRAPKSK  60
   61 EGYAAIGGGS PLRKITDEQA DAIKMSLQAK NIAANVYVGM RYWYPFTEEA VQQIKKDKIT 120
  121 RLVVLPLYPQ YSISTTGSSI RVLQDLFRKD PYLAGVPVAI IKSWYQRRGY VNSMADLIEK 180
  181 ELQTFSDPKE VMIFFSAHGV PVSYVENAGD PYQKQMEECI DLIMEELKAR GVLNDHKLAY 240
  241 QSRVGPVQWL KPYTDEVLVD LGKSGVKSLL AVPVSFVSEH IETLEEIDME YRELALESGV 300
  301 ENWGRVPALG LTPSFITDLA DAVIESLPSA EAMSNPNAVV DSEDSESSDA FSYIVKMFFG 360
  361 SILAFVLLLS PKMFHAFRNL 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 109.0
Match: 2po7A
Description: No description for 2po7A was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle