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View Structure Prediction Details

Protein: HMCS_ARATH
Organism: Arabidopsis thaliana
Length: 461 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for HMCS_ARATH.

Description E-value Query
Range
Subject
Range
gi|7799986 - gi|7799986|gb|AAF69804.1|AF148847_1 HMG-CoA synthase [Brassica juncea]
382.0 [0..1] [461..1]

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Predicted Domain #1
Region A:
Residues: [1-461]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKNVGILAM DIYFPPTCVQ QEALEAHDGA SKGKYTIGLG QDCLAFCTEL EDVISMSFNA  60
   61 VTSLFEKYKI DPNQIGRLEV GSETVIDKSK SIKTFLMQLF EKCGNTDVEG VDSTNACYGG 120
  121 TAALLNCVNW VESNSWDGRY GLVICTDSAV YAEGPARPTG GAAAIAMLIG PDAPIVFESK 180
  181 LRASHMAHVY DFYKPNLASE YPVVDGKLSQ TCYLMALDSC YKHLCNKFEK IEGKEFSIND 240
  241 ADYIVFHSPY NKLVQKSFAR LLYNDFLRNA SSIDEAAKEK FTPYSSLTLD ESYQSRDLEK 300
  301 VSQQIAKPFY DAKVQPTTLI PKEVGNMYTA SLYAAFASLI HKKHNDLAGK RVVMFSYGSG 360
  361 STATMFSLRL NDNKPPFSIS NIASVMDVGG KLKARHEYAP EKFVETMKLM EHRYGAKDFV 420
  421 TTKEGIIDLL APGTYYLKEV DSLYRRFYGK KGEDGSVANG H

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 101.0
Match: 2f82A
Description: No description for 2f82A was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle