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View Structure Prediction Details

Protein: GLR14_ARATH
Organism: Arabidopsis thaliana
Length: 861 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

No multiple sequence alignment data found for GLR14_ARATH.

Predicted Domain #1
Region A:
Residues: [1-580]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MENCMIRNTG YFLTIFFLAF ISFAVTCSGT NQKDNVDRLP VVYEDVRIGL VVDMGSMEGK  60
   61 LVTTSISMAL SDFYHVNNGY RTRVSVLSRD SHGDPLQALA AAMDLLQTEQ VEALVGGQSL 120
  121 LEAKNLAELG EKTKVPVISS FQVPSSLSLA KYNYFIQATH DTSSEAKGIA ALFSNFDWRT 180
  181 AVLIYEDDDD WRESIQPLVG HFQQNAIHIE YKAEFSVSSN EECIMKQLRK FKASGIRIFV 240
  241 AHISERIANR LFPCARRLGM MEEGYAWILT ARSMNNFQDT NYLAKEEMEG VIGFKSYIPL 300
  301 TEELHNFTLR WKRSLRLEEV VTRMSVCSIW AHDIAWSLAR AAEVAKLPGL SVYDLLEAIP 360
  361 ESAKHKGLSG DIKFIDKKFI SDKFEIVNMI GRGERSVGLW NSGSFISNRR RRLSSTKALE 420
  421 TIIWPGGSTR IPKIRSLKEK RHGKKKKLRV LVPAGNITPQ ILEVKTDFKT GVTAATGYCI 480
  481 DVFETSILPF NYEVEYIPWP GAINYKNYND LVYTLYSQKD KYDAAVGDIT ITDNRSLYVD 540
  541 FTLPFTDMGL AVVTAKDKSM WIIFKPLTLS LWLTIASFFI 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 57.30103
Match: 2e4uA
Description: No description for 2e4uA was found.

Predicted Domain #2
Region A:
Residues: [581-861]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LTGAIVWLIE RHDNADFQGS CFQQIGTLLC FGFSTLVFAH RERLQHNMSR FVVIVWIFAV  60
   61 LILTSNYTAT LTSVMTVQQI RGLKSNENIG FFSASIAANV VNDNPTFQGP RYKGLKTADD 120
  121 FTNALRNGTI SFIVDEVPYV KLFVAKHPSE FVIVETESVT NGFGFAFQKG SPLVQKVSRE 180
  181 IEKLRRTEKL KAIENWWFQR QTTSATSEDT FHPLTVYTFR GLFMITGVSF AFALIVYLIP 240
  241 WNREQRQVVL KHFHRYVSHR FAREIRPSPT TPNRQNENSV I

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 27.69897
Match: 1yaeA
Description: Structure of the Kainate Receptor Subunit GluR6 Agonist Binding Domain Complexed with Domoic Acid
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle