YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: FUT1_ARATH
Organism: Arabidopsis thaliana
Length: 558 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FUT1_ARATH.

Description E-value Query
Range
Subject
Range
gi|5231145 - gi|5231145|gb|AAD41092.1|AF154111_1 xyloglucan fucosyltransferase [Arabidopsis thaliana]
1080.0 [0..1] [558..1]

Back

Predicted Domain #1
Region A:
Residues: [1-180]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDQNSYRRRS SPIRTTTGGS KSVNFSELLQ MKYLSSGTMK LTRTFTTCLI VFSVLVAFSM  60
   61 IFHQHPSDSN RIMGFAEARV LDAGVFPNVT NINSDKLLGG LLASGFDEDS CLSRYQSVHY 120
  121 RKPSPYKPSS YLISKLRNYE KLHKRCGPGT ESYKKALKQL DQEHIDGDGE CKYVVWISFS 180
  181 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [181-558]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GLGNRILSLA SVFLYALLTD RVLLVDRGKD MDDLFCEPFL GMSWLLPLDF PMTDQFDGLN  60
   61 QESSRCYGYM VKNQVIDTEG TLSHLYLHLV HDYGDHDKMF FCEGDQTFIG KVPWLIVKTD 120
  121 NYFVPSLWLI PGFDDELNKL FPQKATVFHH LGRYLFHPTN QVWGLVTRYY EAYLSHADEK 180
  181 IGIQVRVFDE DPGPFQHVMD QISSCTQKEK LLPEVDTLVE RSRHVNTPKH KAVLVTSLNA 240
  241 GYAENLKSMY WEYPTSTGEI IGVHQPSQEG YQQTEKKMHN GKALAEMYLL SLTDNLVTSA 300
  301 WSTFGYVAQG LGGLKPWILY RPENRTTPDP SCGRAMSMEP CFHSPPFYDC KAKTGIDTGT 360
  361 LVPHVRHCED ISWGLKLV

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 4.83
Match: 2hhcA
Description: No description for 2hhcA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle