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View Structure Prediction Details

Protein: EXLB1_ARATH
Organism: Arabidopsis thaliana
Length: 250 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for EXLB1_ARATH.

Description E-value Query
Range
Subject
Range
gi|21615409 - gi|21615409|emb|CAD33924.1| alpha-expansin 4 [Cicer arietinum]
331.0 [0..1] [249..1]

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Predicted Domain #1
Region A:
Residues: [1-250]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKHSHVLLLL FVQVIVLLPL LCLSDDFVNS RATYYGSPDC KANPRGHCGY GEFGRDINNG  60
   61 EVSGVSWRLW NNGTGCGACY QVRCKIPPHC SEEGVYVVAT DSGEGDGTDF ILSPKAYGRM 120
  121 ARPGTENQLY SFGVVNVEYQ RIPCRYAGYN LVYKIHEKSY NPHYLAILVL YVGGVNDILA 180
  181 VEVWQEDCKE WRRMRRVFGA VHDLQNPPRG TLTLRFLVYG SAGINWIQSP NAIPADWTAG 240
  241 ATYDSNILLT 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 83.69897
Match: 1n10A
Description: PHL P 1 C-terminal domain; Pollen allergen PHL P 1 N-terminal domain
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle