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View Structure Prediction Details

Protein: EXPA8_ARATH
Organism: Arabidopsis thaliana
Length: 253 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for EXPA8_ARATH.

Description E-value Query
Range
Subject
Range
gi|81230695 - gi|81230695|gb|ABB59694.1| alpha-expansin 2 [Gossypium hirsutum]
376.0 [0..1] [253..1]

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Predicted Domain #1
Region A:
Residues: [1-253]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYTPSYLKYS IISIISVLFL QGTHGDDGGW QGGHATFYGG EDASGTMGGA CGYGNLYGQG  60
   61 YGTNTAALST ALFNNGLTCG ACYEMKCNDD PRWCLGSTIT VTATNFCPPN PGLSNDNGGW 120
  121 CNPPLQHFDL AEPAFLQIAQ YRAGIVPVSF RRVPCMKKGG IRFTINGHSY FNLVLISNVG 180
  181 GAGDVHAVSI KGSKTQSWQA MSRNWGQNWQ SNSYMNDQSL SFQVTTSDGR TLVSNDVAPS 240
  241 NWQFGQTYQG GQF

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 72.09691
Match: 1n10A
Description: PHL P 1 C-terminal domain; Pollen allergen PHL P 1 N-terminal domain
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle