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View Structure Prediction Details

Protein: ERG12_ARATH
Organism: Arabidopsis thaliana
Length: 517 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ERG12_ARATH.

Description E-value Query
Range
Subject
Range
ERG11_ARATH - Squalene epoxidase 5 OS=Arabidopsis thaliana GN=SQE5 PE=2 SV=2
338.0 [0..1] [517..1]

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Predicted Domain #1
Region A:
Residues: [1-517]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAFTHVCLWT LVAFVLTWTV FYLTNMKKKA TDLADTVAED QKDGAADVII VGAGVGGSAL  60
   61 AYALAKDGRR VHVIERDMRE PERMMGEFMQ PGGRLMLSKL GLQDCLEDID AQKATGLAVY 120
  121 KDGKEADAPF PVDNNNFSYE PSARSFHNGR FVQQLRRKAF SLSNVRLEEG TVKSLLEEKG 180
  181 VVKGVTYKNK EGEETTALAP LTVVCDGCYS NLRRSLNDDN NAEIMSYIVG YISKNCRLEE 240
  241 PEKLHLILSK PSFTMVYQIS STDVRCGFEV LPENFPSIAN GEMSTFMKNT IVPQVPPKLR 300
  301 KIFLKGIDEG AHIKVVPAKR MTSTLSKKKG VIVLGDAFNM RHPVVASGMM VLLSDILILR 360
  361 RLLQPLSNLG DANKVSEVIN SFYDIRKPMS ATVNTLGNAF SQVLIGSTDE AKEAMRQGVY 420
  421 DYLCSGGFRT SGMMALLGGM NPRPLSLVYH LCAITLSSIG QLLSPFPSPL RIWHSLKLFG 480
  481 LAMKMLVPNL KAEGVSQMLF PANAAAYHKS YMAATTL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 43.221849
Match: 2qa1A
Description: No description for 2qa1A was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle