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View Structure Prediction Details

Protein: DTX47_ARATH
Organism: Arabidopsis thaliana
Length: 543 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for DTX47_ARATH.

Description E-value Query
Range
Subject
Range
gi|113548993, gi... - gi|115453843|ref|NP_001050522.1| Os03g0571900 [Oryza sativa (japonica cultivar-group)], gi|113548993...
291.0 [0..75] [535..622]

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Predicted Domain #1
Region A:
Residues: [1-88]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLIKSQRLTL FSPLLSKTRR IPVNSHQTLV AESVITRRTL GAITATPSFH KNPVVIRRRI  60
   61 KLERVTRNCV RIDREIDEEE EEEEKERG

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [89-303]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DLVKQSIWEQ MKEIVKFTGP AMGMWICGPL MSLIDTVVIG QGSSIELAAL GPGTVLCDHM  60
   61 SYVFMFLSVA TSNMVATSLA KQDKKEAQHQ ISVLLFIGLV CGLMMLLLTR LFGPWAVTAF 120
  121 TRGKNIEIVP AANKYIQIRG LAWPFILVGL VAQSASLGMK NSWGPLKALA AATIINGLGD 180
  181 TILCLFLGQG IAGAAWATTA SQIVSAYMMM DSLNK

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 11.537602
Match: PF01554.9
Description: No description for PF01554.9 was found.

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [304-380]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EGYNAYSFAI PSPQELWKIS ALAAPVFISI FSKIAFYSFI IYCATSMGTH VLAAHQVMAQ  60
   61 TYRMCNVWGE PLSQTAQ

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [381-543]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SFMPEMLYGA NRNLPKARTL LKSLMIIGAT LGLVLGVIGT AVPGLFPGVY THDKVIISEM  60
   61 HRLLIPFFMA LSALPMTVSL EGTLLAGRDL KFVSSVMSSS FIIGCLTLMF VTRSGYGLLG 120
  121 CWFVLVGFQW GRFGLYLRRL LSPGGILNSD GPSPYTVEKI KSI

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle