Protein: | DRP1A_ARATH |
Organism: | Arabidopsis thaliana |
Length: | 610 amino acids |
Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for DRP1A_ARATH.
Description | E-value | Query Range |
Subject Range |
|
630.0 | [0..1] | [610..1] |
Region A: Residues: [1-324] |
1 11 21 31 41 51 | | | | | | 1 MENLISLVNK IQRACTALGD HGDSSALPTL WDSLPAIAVV GGQSSGKSSV LESIVGKDFL 60 61 PRGSGIVTRR PLVLQLQKID DGTREYAEFL HLPRKKFTDF AAVRKEIQDE TDRETGRSKA 120 121 ISSVPIHLSI YSPNVVNLTL IDLPGLTKVA VDGQSDSIVK DIENMVRSYI EKPNCIILAI 180 181 SPANQDLATS DAIKISREVD PSGDRTFGVL TKIDLMDKGT DAVEILEGRS FKLKYPWVGV 240 241 VNRSQADINK NVDMIAARKR EREYFSNTTE YRHLANKMGS EHLAKMLSKH LERVIKSRIP 300 301 GIQSLINKTV LELETELSRL GKPI |
Detection Method: | |
Confidence: | 102.0 |
Match: | 2akaB |
Description: | Structure of the nucleotide-free myosin II motor domain from Dictyostelium discoideum fused to the GTPase domain of dynamin 1 from Rattus norvegicus |
Matching Structure (courtesy of the PDB): |
Term | Confidence | Notes |
binding | 2.64537357529343 | bayes_pls_golite062009 |
protein binding | 1.22129154759482 | bayes_pls_golite062009 |
nucleic acid binding | 0.777787753097919 | bayes_pls_golite062009 |
DNA binding | 0.479412476059825 | bayes_pls_golite062009 |
purine nucleotide binding | 0.442941451960958 | bayes_pls_golite062009 |
purine ribonucleotide binding | 0.440672169804309 | bayes_pls_golite062009 |
ribonucleotide binding | 0.440612929099368 | bayes_pls_golite062009 |
nucleotide binding | 0.433111366205869 | bayes_pls_golite062009 |
transcription regulator activity | 0.312171320541728 | bayes_pls_golite062009 |
Region A: Residues: [325-506] |
1 11 21 31 41 51 | | | | | | 1 AADAGGKLYS IMEICRLFDQ IFKEHLDGVR AGGEKVYNVF DNQLPAALKR LQFDKQLAMD 60 61 NIRKLVTEAD GYQPHLIAPE QGYRRLIESS IVSIRGPAEA SVDTVHAILK DLVHKSVNET 120 121 VELKQYPALR VEVTNAAIES LDKMREGSKK ATLQLVDMEC SYLTVDFFRK LPQDVEKGGN 180 181 PT |
Detection Method: | |
Confidence: | 32.376751 |
Match: | PF01031.11 |
Description: | No description for PF01031.11 was found. |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Region A: Residues: [507-610] |
1 11 21 31 41 51 | | | | | | 1 HSIFDRYNDS YLRRIGSNVL SYVNMVCAGL RNSIPKSIVY CQVREAKRSL LDHFFAELGT 60 61 MDMKRLSSLL NEDPAIMERR SAISKRLELY RAAQSEIDAV AWSK |
Detection Method: | |
Confidence: | 39.958607 |
Match: | PF02212.9 |
Description: | No description for PF02212.9 was found. |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.