YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: CP74A_ARATH
Organism: Arabidopsis thaliana
Length: 518 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CP74A_ARATH.

Description E-value Query
Range
Subject
Range
gi|115496944, gi... - gi|94574282|gb|AAI16042.1| Cytochrome P450, family 2, subfamily C, polypeptide 18 [Bos taurus], gi|1...
325.0 [0..47] [518..20]

Back

Predicted Domain #1
Region A:
Residues: [1-518]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASISTPFPI SLHPKTVRSK PLKFRVLTRP IKASGSETPD LTVATRTGSK DLPIRNIPGN  60
   61 YGLPIVGPIK DRWDYFYDQG AEEFFKSRIR KYNSTVYRVN MPPGAFIAEN PQVVALLDGK 120
  121 SFPVLFDVDK VEKKDLFTGT YMPSTELTGG YRILSYLDPS EPKHEKLKNL LFFLLKSSRN 180
  181 RIFPEFQATY SELFDSLEKE LSLKGKADFG GSSDGTAFNF LARAFYGTNP ADTKLKADAP 240
  241 GLITKWVLFN LHPLLSIGLP RVIEEPLIHT FSLPPALVKS DYQRLYEFFL ESAGEILVEA 300
  301 DKLGISREEA THNLLFATCF NTWGGMKILF PNMVKRIGRA GHQVHNRLAE EIRSVIKSNG 360
  361 GELTMGAIEK MELTKSVVYE CLRFEPPVTA QYGRAKKDLV IESHDAAFKV KAGEMLYGYQ 420
  421 PLATRDPKIF DRADEFVPER FVGEEGEKLL RHVLWSNGPE TETPTVGNKQ CAGKDFVVLV 480
  481 ARLFVIEIFR RYDSFDIEVG TSPLGSSVNF SSLRKASF

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 85.045757
Match: 1pq2A
Description: Crystal Structure of Human Drug Metabolizing Cytochrome P450 2C8
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.078052786575534 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle