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View Structure Prediction Details

Protein: CONS_ARATH
Organism: Arabidopsis thaliana
Length: 373 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CONS_ARATH.

Description E-value Query
Range
Subject
Range
gi|41323976 - gi|41323976|gb|AAS00054.1| CONSTANS-like protein CO1 [Populus deltoides]
368.0 [0..1] [373..51]

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Predicted Domain #1
Region A:
Residues: [1-66]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLKQESNDIG SGENNRARPC DTCRSNACTV YCHADSAYLC MSCDAQVHSA NRVASRHKRV  60
   61 RVCESC

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 7.0
Match: 2ffwA
Description: No description for 2ffwA was found.

Predicted Domain #2
Region A:
Residues: [67-157]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ERAPAAFLCE ADDASLCTAC DSEVHSANPL ARRHQRVPIL PISGNSFSSM TTTHHQSEKT  60
   61 MTDPEKRLVV DQEEGEEGDK DAKEVASWLF P

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 0.992
Match: 2djaA
Description: No description for 2djaA was found.

Predicted Domain #3
Region A:
Residues: [158-264]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NSDKNNNNQN NGLLFSDEYL NLVDYNSSMD YKFTGEYSQH QQNCSVPQTS YGGDRVVPLK  60
   61 LEESRGHQCH NQQNFQFNIK YGSSGTHYND NGSINHNAYI SSMETGV

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [265-373]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VPESTACVTT ASHPRTPKGT VEQQPDPASQ MITVTQLSPM DREARVLRYR EKRKTRKFEK  60
   61 TIRYASRKAY AEIRPRVNGR FAKREIEAEE QGFNTMLMYN TGYGIVPSF

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


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