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View Structure Prediction Details

Protein: CKX3_ARATH
Organism: Arabidopsis thaliana
Length: 523 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CKX3_ARATH.

Description E-value Query
Range
Subject
Range
gi|91685822, gi|... - gi|91781868|ref|YP_557074.1| putative FAD-binding oxidase [Burkholderia xenovorans LB400], gi|916858...
360.0 [0..23] [516..6]

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Predicted Domain #1
Region A:
Residues: [1-523]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASYNLRSQV RLIAITIVII ITLSTPITTN TSPQPWNILS HNEFAGKLTS SSSSVESAAT  60
   61 DFGHVTKIFP SAVLIPSSVE DITDLIKLSF DSQLSFPLAA RGHGHSHRGQ ASAKDGVVVN 120
  121 MRSMVNRDRG IKVSRTCLYV DVDAAWLWIE VLNKTLELGL TPVSWTDYLY LTVGGTLSNG 180
  181 GISGQTFRYG PQITNVLEMD VITGKGEIAT CSKDMNSDLF FAVLGGLGQF GIITRARIKL 240
  241 EVAPKRAKWL RFLYIDFSEF TRDQERVISK TDGVDFLEGS IMVDHGPPDN WRSTYYPPSD 300
  301 HLRIASMVKR HRVIYCLEVV KYYDETSQYT VNEEMEELSD SLNHVRGFMY EKDVTYMDFL 360
  361 NRVRTGELNL KSKGQWDVPH PWLNLFVPKT QISKFDDGVF KGIILRNNIT SGPVLVYPMN 420
  421 RNKWNDRMSA AIPEEDVFYA VGFLRSAGFD NWEAFDQENM EILKFCEDAN MGVIQYLPYH 480
  481 SSQEGWVRHF GPRWNIFVER KYKYDPKMIL SPGQNIFQKI NSS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 61.522879
Match: 1w1oA
Description: Native Cytokinin Dehydrogenase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.310870522438846 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle