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View Structure Prediction Details

Protein: CHSY_ARATH
Organism: Arabidopsis thaliana
Length: 395 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CHSY_ARATH.

Description E-value Query
Range
Subject
Range
gi|12002443 - gi|12002443|gb|AAG43353.1|AF144535_1 chalcone synthase [Thlaspi arvense]
405.0 [0..1] [394..1]

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Predicted Domain #1
Region A:
Residues: [1-395]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVMAGASSLD EIRQAQRADG PAGILAIGTA NPENHVLQAE YPDYYFRITN SEHMTDLKEK  60
   61 FKRMCDKSTI RKRHMHLTEE FLKENPHMCA YMAPSLDTRQ DIVVVEVPKL GKEAAVKAIK 120
  121 EWGQPKSKIT HVVFCTTSGV DMPGADYQLT KLLGLRPSVK RLMMYQQGCF AGGTVLRIAK 180
  181 DLAENNRGAR VLVVCSEITA VTFRGPSDTH LDSLVGQALF SDGAAALIVG SDPDTSVGEK 240
  241 PIFEMVSAAQ TILPDSDGAI DGHLREVGLT FHLLKDVPGL ISKNIVKSLD EAFKPLGISD 300
  301 WNSLFWIAHP GGPAILDQVE IKLGLKEEKM RATRHVLSEY GNMSSACVLF ILDEMRRKSA 360
  361 KDGVATTGEG LEWGVLFGFG PGLTVETVVL HSVPL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 111.0
Match: 1bi5A
Description: Chalcone synthase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 2.14505178497871 bayes_pls_golite062009
transferase activity 1.45483382098717 bayes_pls_golite062009
transferase activity, transferring acyl groups 1.12155569250025 bayes_pls_golite062009
transferase activity, transferring acyl groups other than amino-acyl groups 1.04684145062403 bayes_pls_golite062009
acyltransferase activity 0.932050235566705 bayes_pls_golite062009
naringenin-chalcone synthase activity 0.385839480590315 bayes_pls_golite062009
3-oxoacyl-[acyl-carrier-protein] synthase activity 0.130687514570417 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle