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View Structure Prediction Details

Protein: PDR2_ARATH
Organism: Arabidopsis thaliana
Length: 1179 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

No multiple sequence alignment data found for PDR2_ARATH.

Predicted Domain #1
Region A:
Residues: [1-104]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSFRVGGKV VEKVDLCRKK QLVWRLDVWP FAILYTVWLT TIVPSIDFSD ACIALGGLSA  60
   61 FHILVLLFTT WSVDFKCFVQ FSKVNSIDQA DACKVTPAKF SGSK

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [105-1179]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EVVPLHFRSQ MTDSASSGDM EEIFFDFRKQ RFIYSKELGA FSKLPYPTKE TFGHYLKCTG  60
   61 HGTEAKIATA TEKWGRNVFD YPQPTFQKLM KENCMEPFFV FQVFCVGLWC LDEFWYYSVF 120
  121 TLFMLFMFES TMAKSRLKTL TDLRSVRVDS QTVMVYRSGK WVKLLGTDLL PGDVVSIGRP 180
  181 STQTGGEDKT VPADMLLLVG SAIVNEAILT GESTPQWKVP IVGQRSDEKL SIKRNKNHVL 240
  241 FGGTKILQHS PDKSFSLKTP DGGCLAVVLR TGFETSQGKL MRTILFSTER VTANSWESGL 300
  301 FILFLVVFAV IAAGYVLVKG LEDPTRSKYK LLLGCSLIIT SVIPPELPME LSIAVNTSLL 360
  361 ALVRRGIFCT EPFRIPFAGK VDLCCFDKTG TLTSDDMEFR GVGGLSNCEE AETDMSKVPV 420
  421 RTLEILASCH ALVFVENKLV GDPLEKAALK GIDWSYKADE KALPRRGNGN SVQIMQRYHF 480
  481 ASHLKRMSVI VRIQEEYLAF VKGAPETIQE RLVDVPAQYI ETYKRYTRQG SRVLALAYKR 540
  541 LPDMMVSEAR DMDRDAVESD LTFAGFAVFN CPIRPDSAPV LLELKNSSHD LVMITGDQAL 600
  601 TACHVAGQVH IVSNPVLILG RSGSGNEYKW VSPDEKEIIP YSEKEIETLA ETHDLCIGGD 660
  661 SIEMLQATSA VLRVIPFVKV FARVAPQQKE LILTTFKAVG RGTLMCGDGT NDVGALKQAH 720
  721 VGVALLNNKL PLSPSDSSKD DKSKSKKSKL PLEPASKTIT QNGEGSSKGK IPPQNRHLTA 780
  781 AELQRQKLKK IMDDLNNDEG DGRSAPLVKL GDASMASPFT AKHASVAPVT DIIRQGRSTL 840
  841 VTTLQMFKIL GLNCLATAYV LSVMYLDGVK LGDVQATISG VLTAAFFLFI SHARPLQTLS 900
  901 AERPHPSVFS VYLFLSLIGQ FAVHLTFLVY SVKEAEKHMP EECIEPDASF HPNLVNTVSY 960
  961 MVSMMLQVAT FAVNYMGHPF NQSIRENKPF FYALIAGAGF FTVIASDLFR DLNDSLKLVP1020
 1021 LPQGLRDKLL IWASLMFIIC YSWERLLRWA FPGKISSWKH KQRAVTANLE KKKKV

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 1000.0
Match: 3b8eA
Description: No description for 3b8eA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle