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View Structure Prediction Details

Protein: ATPG1_ARATH
Organism: Arabidopsis thaliana
Length: 373 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ATPG1_ARATH.

Description E-value Query
Range
Subject
Range
ATPG_TOBAC - ATP synthase gamma chain, chloroplastic OS=Nicotiana tabacum GN=ATPC PE=1 SV=1
387.0 [0..1] [373..1]

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Predicted Domain #1
Region A:
Residues: [1-373]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MACSNLTTMW VSSKPSLSAD SSSLSFRSVL KCPTNTSSPP SRASSVSPLQ ASLRELRDRI  60
   61 DSVKNTQKIT EAMKLVAAAK VRRAQEAVVN GRPFSETLVE VLYNINEQLQ TDDVDVPLTK 120
  121 VRPVKKVALV VVTGDRGLCG GFNNFIIKKA EARIKELKGL GLEYTVISVG KKGNSYFLRR 180
  181 PYIPVDKYLE AGTLPTAKEA QAVADDVFSL FISEEVDKVE LLYTKFVSLV KSEPVIHTLL 240
  241 PLSPKGEICD INGTCVDAAE DEFFRLTTKE GKLTVERETF RTPTADFSPI LQFEQDPVQI 300
  301 LDALLPLYLN SQILRALQES LASELAARMS AMSSASDNAS DLKKSLSMVY NRKRQAKITG 360
  361 EILEIVAGAN AQV

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 90.154902
Match: 2qe7G
Description: No description for 2qe7G was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle