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View Structure Prediction Details

Protein: ATE1_ARATH
Organism: Arabidopsis thaliana
Length: 632 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ATE1_ARATH.

Description E-value Query
Range
Subject
Range
gi|51971060 - gi|51971060|dbj|BAD44222.1| arginine-tRNA-protein transferase 1 homolog [Arabidopsis thaliana]
687.0 [0..1] [632..1]
gi|115464181, gi... - gi|51854375|gb|AAU10755.1| unknown protein [Oryza sativa Japonica Group], gi|215701015|dbj|BAG92439....
530.0 [0..18] [631..23]
ATE1 - arginyltransferase 1
458.0 [0..12] [513..3]
gi|73998733 - gi|73998733|ref|XP_544049.2| PREDICTED: similar to Arginyl-tRNA--protein transferase 1 (R-transferas...
458.0 [0..13] [513..4]
gi|114633211 - gi|114633211|ref|XP_508079.2| PREDICTED: arginyltransferase 1 [Pan troglodytes]
451.0 [0..11] [513..63]
gi|109090775 - gi|109090775|ref|XP_001101531.1| PREDICTED: arginyltransferase 1 isoform 1 [Macaca mulatta]
448.0 [0..12] [513..3]

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Predicted Domain #1
Region A:
Residues: [1-157]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLKNDASSS HDGGSNRESV IDDHGRRKST CGYCKSPARS SISHGLSAQT LTVYDYQALI  60
   61 DRGWRRSGTY LYKHEMDKTC CPPYTIRLKA SDFVPTKEQQ RVSRRLERFL DGKLDVQPRE 120
  121 QRGASSSGDV SDTRRKTLGA AKSEENKKVE AVMDDLS

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 49.065502
Match: PF04376.4
Description: No description for PF04376.4 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [158-304]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KNIDQAVQLC IRSGEFPSNM QIPKASVKKV FCARRKKLAE GTEQILYTSN IAFPIAAAIK  60
   61 RIQTSEKEGI NSAEGNRLSP ETISEMLLSA MHKVGETPDV SIKVCKGHIN FLSSAKDSFS 120
  121 DRDVVPNGNI SRGANSLDGS ETLHAKK

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [305-488]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DSENHQARKR KLEIHLKRSS FDPEEHELYK RYQLKVHNDK PGHVVESSYR RFLVDSPLID  60
   61 VQPSGDEKVP PCGFGSFHQQ YRIDGRLIAV GVVDILPKCL SSVYLFWDPD YAFLSLGKYS 120
  121 AIQEINWVIE NQARCPSLQY YYLGYYIHSC SKMRYKAAYR PSELLCPLRF QWVPFEVARP 180
  181 MLDK

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 103.568636
Match: PF04377.6
Description: No description for PF04377.6 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [489-632]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KPYVILSDIA ISHNQCSLLA GASETLVEPA ASEHEDMEQG ETNDNFMGCS DEDEDEDEDD  60
   61 DDDDDDDEEM YETESEDSHI ESDPGSKDND INNILIGLYG SQYRYKEMRQ IITPVGRKQL 120
  121 EPMLQSYRKV VGAELSERMV YEIN

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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Created and Maintained by: Michael Riffle