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View Structure Prediction Details

Protein: ARR10_ARATH
Organism: Arabidopsis thaliana
Length: 552 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ARR10_ARATH.

Description E-value Query
Range
Subject
Range
gi|29830959, gi|... - gi|29830959|ref|NP_825593.1| two-component system response regulator [Streptomyces avermitilis MA-46...
275.0 [0..15] [250..19]

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Predicted Domain #1
Region A:
Residues: [1-248]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTMEQEIEVL DQFPVGMRVL AVDDDQTCLR ILQTLLQRCQ YHVTTTNQAQ TALELLRENK  60
   61 NKFDLVISDV DMPDMDGFKL LELVGLEMDL PVIMLSAHSD PKYVMKGVKH GACDYLLKPV 120
  121 RIEELKNIWQ HVVRKSKLKK NKSNVSNGSG NCDKANRKRK EQYEEEEEEE RGNDNDDPTA 180
  181 QKKPRVLWTH ELHNKFLAAV DHLGVERAVP KKILDLMNVD KLTRENVASH LQKFRVALKK 240
  241 VSDDAIQQ

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 65.522879
Match: 2oqrA
Description: No description for 2oqrA was found.

Predicted Domain #2
Region A:
Residues: [249-461]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ANRAAIDSHF MQMNSQKGLG GFYHHHRGIP VGSGQFHGGT TMMRHYSSNR NLGRLNSLGA  60
   61 GMFQPVSSSF PRNHNDGGNI LQGLPLEELQ INNNINRAFP SFTSQQNSPM VAPSNLLLLE 120
  121 GNPQSSSLPS NPGFSPHFEI SKRLEHWSNA ALSTNIPQSD VHSKPDTLEW NAFCDSASPL 180
  181 VNPNLDTNPA SLCRNTGFGS TNAAQTDFFY PLQ

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [462-552]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNQQPANNSG PVTEAQLFRS SNPNEGLLMG QQKLQSGLMA SDAGSLDDIV NSLMTQEQSQ  60
   61 SDFSEGDWDL DGLAHSEHAY EKLHFPFSLS A

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle