| Protein: | ARFD_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 788 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ARFD_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
742.0 | [0..25] | [786..21] |
|
Region A: Residues: [1-140] |
1 11 21 31 41 51
| | | | | |
1 MEFDLNTEIA EVEEEENDDV GVGVGGGTRI DKGRLGISPS SSSSCSSGSS SSSSSTGSAS 60
61 SIYSELWHAC AGPLTCLPKK GNVVVYFPQG HLEQDAMVSY SSPLEIPKFD LNPQIVCRVV 120
121 NVQLLANKDT DEVYTQVTLL
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [141-298] |
1 11 21 31 41 51
| | | | | |
1 PLQEFSMLNG EGKEVKELGG EEERNGSSSV KRTPHMFCKT LTASDTSTHG GFSVPRRAAE 60
61 DCFAPLDYKQ QRPSQELIAK DLHGVEWKFR HIYRGQPRRH LLTTGWSIFV SQKNLVSGDA 120
121 VLFLRDEGGE LRLGIRRAAR PRNGLPDSII EKNSCSNI
|
| Detection Method: | |
| Confidence: | 37.69897 |
| Match: | 1widA |
| Description: | Solution Structure of the B3 DNA-Binding Domain of RAV1 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [299-392] |
1 11 21 31 41 51
| | | | | |
1 LSLVANAVST KSMFHVFYSP RATHAEFVIP YEKYITSIRS PVCIGTRFRM RFEMDDSPER 60
61 RCAGVVTGVC DLDPYRWPNS KWRCLLVRWD ESFV
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [393-639] |
1 11 21 31 41 51
| | | | | |
1 SDHQERVSPW EIDPSVSLPH LSIQSSPRPK RPWAGLLDTT PPGNPITKRG GFLDFEESVR 60
61 PSKVLQGQEN IGSASPSQGF DVMNRRILDF AMQSHANPVL VSSRVKDRFG EFVDATGVNP 120
121 ACSGVMDLDR FPRVLQGQEI CSLKSFPQFA GFSPAAAPNP FAYQANKSSY YPLALHGIRS 180
181 THVPYQNPYN AGNQSSGPPS RAINFGEETR KFDAQNEGGL PNNVTADLPF KIDMMGKQKG 240
241 SELNMNA
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [640-788] |
1 11 21 31 41 51
| | | | | |
1 SSGCKLFGFS LPVETPASKP QSSSKRICTK VHKQGSQVGR AIDLSRLNGY DDLLMELERL 60
61 FNMEGLLRDP EKGWRILYTD SENDMMVVGD DPWHDFCNVV WKIHLYTKEE VENANDDNKS 120
121 CLEQAALMME ASKSSSVSQP DSSPTITRV
|
| Detection Method: | |
| Confidence: | 0.976 |
| Match: | 1ip9A |
| Description: | Bud emergence mediator Bemp1 |
Matching Structure (courtesy of the PDB): |
|
