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View Structure Prediction Details

Protein: ALA12_ARATH
Organism: Arabidopsis thaliana
Length: 1184 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ALA12_ARATH.

Description E-value Query
Range
Subject
Range
ALA9_ARATH - Putative phospholipid-transporting ATPase 9 OS=Arabidopsis thaliana GN=ALA9 PE=3 SV=1
878.0 [0..15] [1184..15]

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Predicted Domain #1
Region A:
Residues: [1-1184]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATVSGRRRK RKIQLSKLFT LTGAKACFKP DHSKIGRSGF SRVVFCNQPD SPEAESRNYC  60
   61 DNYVRTTKYT LATFLPKSLF EQFRRVANFY FLVVGILSFT PLAPYTAVSA IVPLTFVILA 120
  121 TMFKEGVEDW RRKQQDIEVN NRKVRVHRGN GNFDLREWKT LRVGDILKVE KNEFFPADLV 180
  181 LLSSSYEDAV CYVETMNLDG ETNLKLKQGL EVTLSLREEL NFRDFEAFIK CEDPNANLYS 240
  241 FVGTMDLKGE KYPLSPQQLL LRGSKLRNTD YIYGVVIFTG PDTKVVQNST DPPSKRSMIE 300
  301 RKMDKIIYLM FLMVFSLAFF GSVLFGIWTR DDFQNGVMER WYLKPDDSSI FFDPKRAPMA 360
  361 AIYHFLTALM LNSYFIPISL YVSIEIVKVL QSIFINQDIH MYYEEADKPA HARTSNLNEE 420
  421 LGQVGTILSD KTGTLTCNSM EFIKCSIAGT AYGRGVTEVE MAMDKRKGSA LVNQSNGNST 480
  481 EDAVAAEPAV KGFNFRDERI MDGNWVTETH ADVIQKFFQL LAVCHTVIPE VDEDTGKISY 540
  541 EAESPDEAAF VIAARELGFE FFTRTQTTIS VRELDLVTGE RVERLYSVLN VLEFSSSKKR 600
  601 MSVIVQDQDG KLLLLCKGAD SVMFERLSES GRKYEKETRD HVNEYADAGL RTLILAYREL 660
  661 DENEYEVFTE RISEAKNSVS ADREALIDEV TEKIEKNLVL LGATAVEDKL QNGVPDCINK 720
  721 LAQAGIKIWV LTGDKMETAI NIGFACSLLR RDMKQIIINL ETPEIQQLEK SGEKDAIAAL 780
  781 KENVLHQITS GKAQLKASGG NAKAFALIID GKSLAYALEE DMKGIFLELA IGCASVICCR 840
  841 SSPKQKALVT RLVKTGSGQT TLAIGDGAND VGMLQEADIG VGISGVEGMQ AVMSSDIAIA 900
  901 QFRYLERLLL VHGHWCYRRI SKMICYFFYK NITFGFTLFL YEAYTSFSAT PAYNDWYLSL 960
  961 YSVFFTSLPV ICLGIFDQDV SAPFCLKFPV LYQEGVQNLL FSWRRILSWM FHGFCSAIII1020
 1021 FFLCKTSLES QAFNHEGKTA GRDILGGTMY TCVVWVVSLQ MVLTISYFTL IQHVVVWGSV1080
 1081 VIWYLFLMVY GSLPIRMSTD AYMVFLEALA PAPSYWITTL FVVLSTMMPY FIFSAIQMRF1140
 1141 FPMSHGTVQL LRYEDQCSNS GNFEMGRQGS VRPTLVMRSH QPES

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 153.0
Match: 1iwoA
Description: Calcium ATPase, transduction domain A; Calcium ATPase, catalytic domain P; Calcium ATPase; Calcium ATPase, transmembrane domain M
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle