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View Structure Prediction Details

Protein: PIN5_ARATH
Organism: Arabidopsis thaliana
Length: 367 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PIN5_ARATH.

Description E-value Query
Range
Subject
Range
PIN8_ARATH - Putative auxin efflux carrier component 8 OS=Arabidopsis thaliana GN=PIN8 PE=3 SV=2
188.0 [0..1] [365..1]

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Predicted Domain #1
Region A:
Residues: [1-175]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MISWLDIYHV VSATVPLYVS MTLGFLSARH LKLFSPEQCA GINKFVAKFS IPLLSFQIIS  60
   61 ENNPFKMSPK LILSDILQKF LVVVVLAMVL RFWHPTGGRG GKLGWVITGL SISVLPNTLI 120
  121 LGMPILSAIY GDEAASILEQ IVVLQSLIWY TILLFLFELN AARALPSSGA SLEHT

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [176-367]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GNDQEEANIE DEPKEEEDEE EVAIVRTRSV GTMKILLKAW RKLIINPNTY ATLIGIIWAT  60
   61 LHFRLGWNLP EMIDKSIHLL SDGGLGMAMF SLGLFMASQS SIIACGTKMA IITMLLKFVL 120
  121 GPALMIASAY CIRLKSTLFK VAILQAALPQ GVVPFVFAKE YNLHPEIIST GVIFGMLIAL 180
  181 PTTLAYYFLL DL

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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