| Protein: | PIN2_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 647 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PIN2_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
551.0 | [0..1] | [647..1] |
|
Region A: Residues: [1-189] |
1 11 21 31 41 51
| | | | | |
1 MITGKDMYDV LAAMVPLYVA MILAYGSVRW WGIFTPDQCS GINRFVAVFA VPLLSFHFIS 60
61 SNDPYAMNYH FLAADSLQKV VILAALFLWQ AFSRRGSLEW MITLFSLSTL PNTLVMGIPL 120
121 LRAMYGDFSG NLMVQIVVLQ SIIWYTLMLF LFEFRGAKLL ISEQFPETAG SITSFRVDSD 180
181 VISLNGREP
|
| Detection Method: |  |
| Confidence: | 10.657577 |
| Match: | PF03547.9 |
| Description: | No description for PF03547.9 was found. |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [190-481] |
1 11 21 31 41 51
| | | | | |
1 LQTDAEIGDD GKLHVVVRRS SAASSMISSF NKSHGGGLNS SMITPRASNL TGVEIYSVQS 60
61 SREPTPRASS FNQTDFYAMF NASKAPSPRH GYTNSYGGAG AGPGGDVYSL QSSKGVTPRT 120
121 SNFDEEVMKT AKKAGRGGRS MSGELYNNNS VPSYPPPNPM FTGSTSGASG VKKKESGGGG 180
181 SGGGVGVGGQ NKEMNMFVWS SSASPVSEAN AKNAMTRGSS TDVSTDPKVS IPPHDNLATK 240
241 AMQNLIENMS PGRKGHVEMD QDGNNGGKSP YMGKKGSDVE DGGPGPRKQQ MP
|
| Detection Method: | |
| Confidence: | 0.968 |
| Match: | 1dv4A |
| Description: | 30S subunit |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [482-647] |
1 11 21 31 41 51
| | | | | |
1 PASVMTRLIL IMVWRKLIRN PNTYSSLFGL AWSLVSFKWN IKMPTIMSGS ISILSDAGLG 60
61 MAMFSLGLFM ALQPKIIACG KSVAGFAMAV RFLTGPAVIA ATSIAIGIRG DLLHIAIVQA 120
121 ALPQGIVPFV FAKEYNVHPD ILSTAVIFGM LVALPVTVLY YVLLGL
|
| Detection Method: | |
| Confidence: | 7.130768 |
| Match: | PF03547.9 |
| Description: | No description for PF03547.9 was found. |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
