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View Structure Prediction Details

Protein: exc-4
Organism: Caenorhabditis elegans
Length: 290 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for exc-4.

Description E-value Query
Range
Subject
Range
gi|39584459, gi|... - gi|39584459|emb|CAE72597.1| Hypothetical protein CBG19786 [Caenorhabditis briggsae], gi|187023885|em...
gi|157748599 - gi|157748599|ref|XP_001669394.1| Hypothetical protein CBG19786 [Caenorhabditis briggsae AF16]
198.0 [0..1] [290..1]

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Predicted Domain #1
Region A:
Residues: [1-290]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAEAYQIQSN GDPQSKPLLE LYVKASGIDA RRIGADLFCQ EFWMELYALY EIGVARVEVK  60
   61 TVNVNSEAFK KNFLGAQPPI MIEEEKELTY TDNREIEGRI FHLAKEFNVP LFEKDPSAEK 120
  121 RIENLYRNFK LFLRAKVEFD KGKKEPSRVE DLPAQIKVHY NRVCEQLSNI DQLLSERKSR 180
  181 YLLGNSMTEY DCELMPRLHH IRIIGLSLLG FDIPHNFTHL WAYILTAYRT AAFIESCPAD 240
  241 QDIIHHYKEQ MNLFTNQRET LQSPTKTHTI PEKVLSDIRV KGLAPDVNVH 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 40.045757
Match: 2d2zA
Description: No description for 2d2zA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle