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View Structure Prediction Details

Protein: fbxc-21
Organism: Caenorhabditis elegans
Length: 415 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for fbxc-21.

Description E-value Query
Range
Subject
Range
CE11390 - WBGene00019041 status:Partially_confirmed TR:Q9TZG2 protein_id:AAC67487.1
340.0 [0..1] [414..23]

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Predicted Domain #1
Region A:
Residues: [1-122]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MENSKWLEPV LRYLRAGTRF QLSERCPSIR PLEKNTVLHI KLLQLCQDAV NIDDSLLYEI  60
   61 SVVEDHVHPI GLDLDEHCSI DMDIQVEQKQ NEILIDNRSE ELARANIDYE QNLITREKRR 120
  121 IA

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [123-240]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NLPNEEERVK PRAALDRRTM IHQMKSLRLI SSITNIPPLT VGLNPIEHHM SFSIHRTKSG  60
   61 NDGYLVKITT IHEERLTYDK KLHDAQFYIL EKLFGGRSCI NVLTLSIDSI GILRIPSN

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [241-317]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LNLKFQGLDC YEYEPDNILK ALRPFLTPSV LPLKTLQICS VPEMPHPIVE SAEELTLITK  60
   61 DRLITLTNLK VTVLSYD

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [318-415]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKSVEEPAEL IKKWLRDGKQ IGTVFTLSSF KEIKSKILLD DVKRRFKEKI VRVEESNGDL  60
   61 TSVTLSMNDS AELVIQRDLV QNTWKVILKV QSSREEEI

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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Created and Maintained by: Michael Riffle