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View Structure Prediction Details

Protein: lat-1
Organism: Caenorhabditis elegans
Length: 114 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for lat-1.

Description E-value Query
Range
Subject
Range
lat-1 - status:Confirmed UniProt:Q8I131 protein_id:CAD59141.1
124.0 [0..1] [112..1]

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Predicted Domain #1
Region A:
Residues: [1-114]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRRNKTTYSL LQTILVACLL TVTPTFASNK PTTDESGTIS HTICDGEAAE LSCPAGKVIS  60
   61 IVLGNYGRFS VAVCLPDNDI VPSNINCQNH KTKSILEKNY HDDYNHNYIN YYNR

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 4.886057
Match: PF02140.9
Description: No description for PF02140.9 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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Created and Maintained by: Michael Riffle