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View Structure Prediction Details

Protein: CE36039
Organism: Caenorhabditis elegans
Length: 237 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE36039.

Description E-value Query
Range
Subject
Range
gi|39587039, gi|... - gi|39587039|emb|CAE62974.1| Hypothetical protein CBG07192 [Caenorhabditis briggsae], gi|187033556|em...
gi|157753728 - gi|157753728|ref|XP_001680576.1| Hypothetical protein CBG07192 [Caenorhabditis briggsae AF16]
335.0 [0..11] [237..11]

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Predicted Domain #1
Region A:
Residues: [1-237]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRSVIIICSA ILFNFGIGAQ IDTVVLDELL QEIVDSSMSE LRHRLQEAVF ATSFRRKILG  60
   61 NSEKGEKNPK NLENLLLDDY LKPQKLALSL ETYTSQAPPT TTTVIPVKLV TAADVAISAQ 120
  121 QRVFKDDVSN FANFSDKAAE KSIYSIPRVP VYVAVTVIAA CILTFVLLVG TVIYFLTNRW 180
  181 KETRMKMDLG APPGRILDPL SVQGLATCHV NNVFPGSRRS SLYLDQDRTT SSIWAHP

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Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle