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View Structure Prediction Details

Protein: CE35776
Organism: Caenorhabditis elegans
Length: 642 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE35776.

Description E-value Query
Range
Subject
Range
CE30721 - status:Partially_confirmed UniProt:O76677 protein_id:AAC27089.3
705.0 [0..1] [630..1]

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Predicted Domain #1
Region A:
Residues: [1-237]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQSQDPVYSQ NDPLLVDNSI ISKKRDHWKT IAKIATVFIG ILFITSEVVG KNNENKHDSL  60
   61 ANQTLGDNAT EANSLPPLHR TYFKTQIKSI LLRPKPGQNS VKFTYDIIKN TYSHDNDDGS 120
  121 QVRPYVASNI ERVVDKENNE TYLHPEYPLE IAHIHWVFNV EIPGKSVEKI LVQVPGIEHN 180
  181 ADDEGEIYAK FAVNKTSNNI PMNKTMALDR NIDTVTMNII IHKPIKFLKT NSKESSG

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 46.39794
Match: 2g9gA
Description: No description for 2g9gA was found.

Predicted Domain #2
Region A:
Residues: [238-384]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VTFSIKVYWK LRRSEELKEQ YGYIQLQPES GQNYVKFTYD IINNIYSHDN EDGSPVNPKQ  60
   61 VFNIKRVVDE ENNEAYIGQE ALYRRSNMYW QFDLRNTGKN VEKVVVKMTG MDEITQYAGS 120
  121 NCTDIPINES LTIEQYVGKL YIEITLH

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 42.070581
Match: PF04721.8
Description: No description for PF04721.8 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [385-440]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RPIKVLKTDV KGRKSVESFS IEVYWKDEPS YPLTTTTAVT EMNTTPKTIA TSPTSK

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [441-642]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DPKLHLQYDN TTTTFTQEDK LIELRPTSEA NYVKFWYNIV RNTYSQTHTN GSPVKPYLVA  60
   61 NIERTIDTRL GEVFLHKKER SEHWASIAWF FNIDVKGKLV EKIIIRMSGI EELILNSGTT 120
  121 QIGENLNLIS KSTRIPIEQN LTIDNPQLQV FFIMLHWSTD ENQQMDARAF KTDLEDGINS 180
  181 ESFSVEVFWK SKQDHNQTTI SI

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 4.9
Match: 2g9gA
Description: No description for 2g9gA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle