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View Structure Prediction Details

Protein: grsp-2
Organism: Caenorhabditis elegans
Length: 281 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for grsp-2.

Description E-value Query
Range
Subject
Range
gi|113461768, gi... - gi|113461768|ref|YP_719837.1| large adhesin [Haemophilus somnus 129PT], gi|112823811|gb|ABI25900.1| ...
281.0 [0..4] [280..1447]

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Predicted Domain #1
Region A:
Residues: [1-281]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLTLLLLAV VLAYVAAQGD GLFGGSDAGS GIGSSGGWGG SDASAGASAG GTGGGRGGGR  60
   61 GGSGGGRGGG SGGGRGGSGG AGAGGSGSGS GGWGGQDGGS SAGGWGGSQG GSQGGSSGGW 120
  121 GGSSRSDSGS GQGGWGGQQG GNSNAGGWGG SQGGQNGGGG RGGSGGQGGW GGSQDGGSQG 180
  181 GWGGQNGGGQ GGNQGGGGGR GGNQGGEQGG WGGQGGSQGG SQGGSQGGWG NQGGQQGGGR 240
  241 GGQQGPGGWG GGGRGGGWGG WGRGSRWGWG RPSWGGWGRG W

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 30.154902
Match: 1y0fA
Description: No description for 1y0fA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle