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View Structure Prediction Details

Protein: tbc-3
Organism: Caenorhabditis elegans
Length: 475 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for tbc-3.

Description E-value Query
Range
Subject
Range
gi|115496465, gi... - gi|92097460|gb|AAI14651.1| TBC1 domain family, member 22A [Bos taurus], gi|115496465|ref|NP_00106998...
340.0 [0..5] [470..51]

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Predicted Domain #1
Region A:
Residues: [1-122]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLLCTNLCFK RLDQFSAGKI GHEINNNDVS DAWDTRVKVD ETLASASAAK VLAAHAAGKT  60
   61 HRDEEIMPPV SAAPTKNSRQ QALQRLAIQK EPLPSSVSST PQTANPIYPK LPEISDQPRS 120
  121 AV

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [123-475]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PMASAPPHGG DRDQTRFARL RRLFSNGKSS GKNSPPVDVD LEKLREDCWM GIPHKLRPQA  60
   61 WRLLSGYLPT NAERREVTLQ CKRDEYWHYV EQYFHSRFDD QNADTFRQIN IDIPRMCPLI 120
  121 PLFQQKMVQE MFERILYIWA IRHPASGYVQ GINDLVTPFF VVFLSEFIPQ DVEVGSFDVS 180
  181 QLPLEQCQLI EADSFWCVSS LLDSIQDNYT FAQPGIQRKV LQLRHLMSRV DRPLHKHLES 240
  241 NGIEYLQFAF RWMNNLLMRE IPLRATIRLW DTYLSEPDGF MQFHNYVCAA FLRTWSKQLQ 300
  301 AEKDFQGVMI LLQNLPTQSW GDREICELTA DAFSLQSVFD GARRHLSAQA ASP

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 68.0
Match: 2qfzA
Description: No description for 2qfzA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle