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View Structure Prediction Details

Protein: CE35433
Organism: Caenorhabditis elegans
Length: 586 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE35433.

Description E-value Query
Range
Subject
Range
gi|113547417, gi... - gi|115450691|ref|NP_001048946.1| Os03g0145000 [Oryza sativa (japonica cultivar-group)], gi|113547417...
382.0 [0..3] [576..84]

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Predicted Domain #1
Region A:
Residues: [1-122]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLLLFNLLI AGWVYSQCPT LQLQEPCTCT STRYEAVSIN CDGGSSLDAV LESLSNSPQA  60
   61 IDSLTISNTP IEKMPGYAFQ GFQIKKLFLR NNGLRSFHPN TFTGNLENSL EELEIRGNYI 120
  121 DG

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 33.045757
Match: 2omxA
Description: No description for 2omxA was found.

Predicted Domain #2
Region A:
Residues: [123-586]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 IPQSGVSILK QLKILSLPDN LIEYVQDNAF LSYHSRDSLL KLDLSANNLT AIHPTGLLGL  60
   61 ENLSQLSLDK NLLSEIPSQA LENIPSLEDL SLGVNRIHTI SRNSLPLPNL KSLSLEVNQI 120
  121 RLIPSDSFSE TPLLSYLYLG NNLLTSIDAS MFLHIGGLKV LSMSNNKDIT SIQANGKLSV 180
  181 QQFKLCICIL AFQHAPSLIR LELFDCSISR IEPKSLQKVQ HIQVILLSRN QITQINAVDD 240
  241 FAFSQLPMLT SLDLSSNRLE SLPSNVIYDS LMQKKTSPVQ RKLSIQNNPW RCDKDLMWLR 300
  301 KWLRDNGDVT TAASNSPPAK CWTPSNLSGL DLRQTDSKLP HKTTKPPVDQ FQYKNQQVTN 360
  361 SNGTSQLGYQ NPHTEVNGLA LVGLILGIVL VVFVSCIILG YLMRFIFLSY EAKTKPNVFG 420
  421 STISSSGCIR NMYGGDGTLV SEDHGHPSSA NNNVYLNRPR HWWF

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 41.39794
Match: 2id5A
Description: No description for 2id5A was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle