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View Structure Prediction Details

Protein: fpn-1.3
Organism: Caenorhabditis elegans
Length: 228 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for fpn-1.3.

Description E-value Query
Range
Subject
Range
gi|74198353 - gi|74198353|dbj|BAE39662.1| unnamed protein product [Mus musculus]
258.0 [0..2] [228..96]

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Predicted Domain #1
Region A:
Residues: [1-228]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVMFFNNFSI LLQVILLVVC KSENQVPALL YLAILFGAIN RLFLNAEKSM IARDWVVALN  60
   61 GKNELSRQNA MLTGFDQLLN ILSPIVVGTL LTKFGMHQTL IVFGIYSMLS LFSKLIFLSL 120
  121 TYNQNVSLQN RQEGYCSLPI SDEEPLFKPS KPRGVISTYW KQTTFCAAFG IALFYKTVMG 180
  181 FDNLAVGYAT SASDLSVITI GALKSYGAVA GMVGVISYAF LEKRIGII

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.19
Match: 1pw4A
Description: Crystal Structure of the Glycerol-3-Phosphate Transporter from E.Coli
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle