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View Structure Prediction Details

Protein: CE35024
Organism: Caenorhabditis elegans
Length: 125 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE35024.

Description E-value Query
Range
Subject
Range
RF1_CLOTH - Peptide chain release factor 1 OS=Clostridium thermocellum (strain ATCC 27405 / DSM 1237 / NBRC 1034...
gi|196251800, gi... - gi|196251800|ref|ZP_03150466.1| peptide chain release factor 1 [Clostridium thermocellum DSM 4150], ...
182.0 [0..3] [122..194]

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Predicted Domain #1
Region A:
Residues: [1-125]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MILKWTLIRR MLATPKQKLK NYKFPDKYIS GWGPGGQKVN TAQNAVQLTH LPTGTVLKVH  60
   61 ESRLLPKNID IAFERMKFVL DRQINGENCY EEQLKRLQIA KEEKSNKRRV QARKEKESYK 120
  121 NESVE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 44.30103
Match: 1rq0A
Description: Crystal structure of peptide releasing factor 1
Matching Structure (courtesy of the PDB):

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Created and Maintained by: Michael Riffle