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View Structure Prediction Details

Protein: mig-14
Organism: Caenorhabditis elegans
Length: 549 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for mig-14.

Description E-value Query
Range
Subject
Range
gi|73959857 - gi|73959857|ref|XP_853835.1| PREDICTED: similar to putative NFkB activating protein 373 isoform 1 is...
694.0 [0..3] [545..2]

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Predicted Domain #1
Region A:
Residues: [1-96]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGGAVIENL SNRKLFVIFA GLLVIQIMFF LIGAWYAPSP SSYMEFEMIT CRDETKGLSG  60
   61 EWIHRDNCQQ ISELSEYTPS SFDLREIVFI AKMPHT

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [97-168]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RDGIELEYSP WFQFLLGVLH VDVEYSEHFK YVAHAPLELE VRMGYRDKES KKNEWKELVT  60
   61 SNVTRILECT IA

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [169-233]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EDEKKAGGTY DCDMLDLFEL GSSSYPFYLI NIRIPINQQA CQFDNKSANC QIGKLTGLRL  60
   61 IEIHQ

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [234-362]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NGGFTLVWLW TKTFMTPVVA ICLWWYYNRI NQLARNPLLL ERAILLLGLS LVILDFPIEW  60
   61 ISLTYRIPFL LLISDLRQGL FYTVLFSFWL IFAGEHLIDD NTRNNLKSYR FNLSFIITAS 120
  121 LGLLIYDLI

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #5
Region A:
Residues: [363-418]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ERGIQLYDPF YSVWSSPTGS QIAYFAIFIS AISTVAYFIF LFFKIARVWS TIKSKR

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #6
Region A:
Residues: [419-549]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SAQIYQTSEN RRLKVEGVIY RFKFLMLFTL LCSAFTIAAY FMKQYGEAQL HGDEARDGFL  60
   61 TGSTSAFFTG AFGMCNIYVL LLLAMYAPSH KHYRGASQLI DENDDDEIME DPSNQHTESN 120
  121 AMTTFLKPST D

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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