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View Structure Prediction Details

Protein: CE34723
Organism: Caenorhabditis elegans
Length: 315 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE34723.

Description E-value Query
Range
Subject
Range
gi|157757141 - gi|157757141|ref|XP_001670914.1| Hypothetical protein CBG19861 [Caenorhabditis briggsae AF16]
gi|187023679, gi... - gi|39588303|emb|CAE72654.1| Hypothetical protein CBG19861 [Caenorhabditis briggsae], gi|187023679|em...
292.0 [0..1] [253..3]

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Predicted Domain #1
Region A:
Residues: [1-145]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLFTLPLLLL LHSVIAFSTP EVQHRSKRFQ LPGQQTINPE AWFCGASRFQ WKISHEVISQ  60
   61 TCDEKAIELN HCCAVHDSCY DNIAQTQEGC DNKFCNCLRN AMTSTKDRYF MCADFVTDAA 120
  121 CSLVRKFGHE HYGTRTPDNR ELTAF

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [146-315]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 HPATNQTANR EYNRLYKSCL GFRKPLISCA YSHLVCTLKM RPLDRYDQSY IQCREDLINC  60
   61 LEDTTSFLKM RENKECSNQL DIALYAIKHD AKLSGLPFYL HYKEDTTTTS TTDTTTTIST 120
  121 TKNTTVTQKP KTNTTNSTVT IEETTLEEKT IATGNHTEMD EFGVYIESEN 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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