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View Structure Prediction Details

Protein: fbxa-158
Organism: Caenorhabditis elegans
Length: 393 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for fbxa-158.

Description E-value Query
Range
Subject
Range
fbxa-165 - status:Partially_confirmed UniProt:O17199 protein_id:AAB70967.1
260.0 [0..1] [391..1]

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Predicted Domain #1
Region A:
Residues: [1-393]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLSFRENKF VIRAFILYEA LDKKPIQESY DNFCKKVGND VMTQYDFDFW FYRFYHGNHD  60
   61 LLYDRSADPV PKSLPNMPLN IISEILAHLD IMDLLVMMKV SRNLRSVVQA KVDVVDSIGV 120
  121 RFFEGKNAKI VYNDRFIITY EPKGGGCTVI YFDSYVNEDD YFLEEYDERS NKKEIFVPGK 180
  181 DYLELFNKDL KCLLENRKIQ LETIEFTFGT GKELCEKCMN GIVEALKSAK SLTSRTVRIW 240
  241 PFSFSELAQL VAFFPAETLE EIYFAGEKDT GFEQLVSLDQ WKNARKFDAD GKLSVPIEHF 300
  301 LHFEWFEVCL ATFTESDAMK IRDMIDRSTH FGHAEIRSKD MNISELMRVF AAHNQNQNFA 360
  361 YETPDKRFFN VKIYSYLFRI TKLSYRYDYN DWL

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.02
Match: 1fs2A
Description: Skp2; Cyclin A/CDK2-associated p19, Skp2
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle