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View Structure Prediction Details

Protein: trx-1
Organism: Caenorhabditis elegans
Length: 114 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for trx-1.

Description E-value Query
Range
Subject
Range
gi|95928472, gi|... - gi|95928472|ref|ZP_01311219.1| thioredoxin [Desulfuromonas acetoxidans DSM 684], gi|95135262|gb|EAT1...
140.0 [0..3] [112..1]

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Predicted Domain #1
Region A:
Residues: [1-114]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLTKEPILE LADMSDFEQL IRQHPEKIII LDFYATWCGP CKAIAPLYKE LATTHKGIIF  60
   61 CKVDVDEAED LCSKYDVKMM PTFIFTKNGD AIEALEGCVE DELRQKVLEH VSAQ

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 31.69897
Match: 2h71A
Description: No description for 2h71A was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle