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View Structure Prediction Details

Protein: cblc-1
Organism: Caenorhabditis elegans
Length: 272 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for cblc-1.

Description E-value Query
Range
Subject
Range
gi|39596779, gi|... - gi|39596779|emb|CAE59006.1| Hypothetical protein CBG02282 [Caenorhabditis briggsae], gi|187037542|em...
gi|157752342 - gi|157752342|ref|XP_001679883.1| Hypothetical protein CBG02282 [Caenorhabditis briggsae AF16]
419.0 [0..4] [272..333]

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Predicted Domain #1
Region A:
Residues: [1-272]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVTEMSHAES IKRVVDQKLS SHEGFESHMF KIGSYNEAVG ESSPFALPYD DSTMALLILS  60
   61 TPDMFDVAFR KWVVQKTMDF GSFDEVCEMV SSPIQSFLED RLEIMSEKLR KVEENFEILH 120
  121 DYSMTPQRRP KILMQTCGHV AGAAFYYQPC HFQEDGVTWP PAGRMGPNLK FIGLSLHPIY 180
  181 GGHFAFRSVL IFPNVKIPEF CEKEPRPILT ASEDVRTALE KFNYNWKDSG FRDFGNPTRR 240
  241 YSTTQMEFFG RPVAERWEVL RPWVDGGAKN ID

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Detection Method: MSA

Shown below is our most confident prediction for this domain.
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Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle