YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: peb-1
Organism: Caenorhabditis elegans
Length: 169 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for peb-1.

Description E-value Query
Range
Subject
Range
peb-1 - status:Confirmed UniProt:Q22491 protein_id:AAA91262.1
247.0 [0..1] [132..1]

Back

Predicted Domain #1
Region A:
Residues: [1-169]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLGLEKPGSS DISSSSTDTS AISPISVSSM PLSPDKEKKK ISFVRYNPDI PQIVTSFKGY  60
   61 QKLMYQGYRY NIYQIAPERN FKSWRCVCAK KMHDGQWCKC RAETTMDNKN ACTKGSHNHP 120
  121 PRHHVAEIEF IKVRGEITQS QLSRLRASAL CNWRSARSEH RYHKVEFAS

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 29.721246
Match: PF04500.7
Description: No description for PF04500.7 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle