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View Structure Prediction Details

Protein: CE34356
Organism: Caenorhabditis elegans
Length: 362 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE34356.

Description E-value Query
Range
Subject
Range
gi|76884351, gi|... - gi|77166037|ref|YP_344562.1| peptidase M24 [Nitrosococcus oceani ATCC 19707], gi|76884351|gb|ABA5903...
gi|207088023 - gi|207088023|gb|EDZ65296.1| peptidase, M24 family [Nitrosococcus oceani AFC27]
gi|224408369, gi... - gi|254436333|ref|ZP_05049839.1| peptidase, M24 family [Nitrosococcus oceani AFC27], gi|224408369|ref...
341.0 [0..2] [362..57]

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Predicted Domain #1
Region A:
Residues: [1-362]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQSGISESSK ETNILFADRR SAYDELWEGA LPTESEWEKT AKFTECVPTS RILQTLEKVC  60
   61 DKGTAVFFDS TSDDLLYKFV QAKANSVREI NHFIERRRVI KSPSEMSSMR DVCNVGAQTM 120
  121 SSMISGSRDL HNENAICGLL EFEGRRRGSE MQAYPPVIAG GVRANTIHYL DANNDLNPRE 180
  181 CVLVDAGCDL NGYVSDVTRC FPISGFWSDA QLSLYEALLY VHEELLTYAH SMEKVRLSAL 240
  241 FRRMNELLAA SFTELGLIRS TDHKEMIHQA EKLCPHHVSH YLGMDVHDCP TVSRDIDLPP 300
  301 NVPFTIEPGV YVPMDWPVKE FRGIGYRIED DVATSEAGGI ELLTAAVPRD PIEIQRLMGT 360
  361 AE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 90.30103
Match: 1jawA
Description: AMINOPEPTIDASE P FROM E. COLI LOW PH FORM
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle