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View Structure Prediction Details

Protein: CE34219
Organism: Caenorhabditis elegans
Length: 406 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE34219.

Description E-value Query
Range
Subject
Range
SYM_THETN - Methionyl-tRNA synthetase OS=Thermoanaerobacter tengcongensis GN=metG PE=3 SV=1
SYM_CALS4 - Methionine--tRNA ligase OS=Caldanaerobacter subterraneus subsp. tengcongensis (strain DSM 15242 / JC...
368.0 [0..1] [405..109]

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Predicted Domain #1
Region A:
Residues: [1-406]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKIQDNGYIY KSTYSGYYSI TDECFIPEED VVKKIVEGGA EKLTLKSNGT PVEWIEEENY  60
   61 MFRLSEFREK VAEWINRENI VVHPSKYKSL ALTSLEMSED LSISRSRSRL SWGIPVPNDP 120
  121 TQTIYVWLDA LVNYLTVTGF PNAQSVWPPT CQVIGKDITK FHLYYWPAFL MAAGLSLPQK 180
  181 VFIHGHWLID NVKMSKSLGN VVNPSEAITK FTAEGLRYFL LKHGNPSYDC SFNWNSCLQT 240
  241 INSDLVNNVG NLLNRSTVEK INKEGMYPKM EIEDIEAEIR ENAKKLMEMV EESRENCVDL 300
  301 YDEMSYFKII ENLMLTMKEA NRLFQSSQPW KEIDEKRLKS LLFVTYDTIR VVTILLQPIT 360
  361 PKMAEFCLNR LGVPKNERNL ENSRFGSYSG GKLGAERGVF IDRIQK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 81.522879
Match: 2csxA
Description: Crystal structure of Aquifex aeolicus methionyl-tRNA synthetase complexed with tRNA(Met)
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle